Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923711.1_cds_XP_016472264.1_64517
CDS Infomation

[gene=LOC107794293] [db_xref=GeneID:107794293] [protein=U-box domain-containing protein 40-like] [protein_id=XP_016472264.1] [location=complement(141396..142826)] [gbkey=CDS]
Sequence

ATGGGTACTAGCAAGCAGAGGTGGAGGATTTCATTTCACAAGTCTCCATCAAAGCAACCA
TCTTTTCCTAAAGAATTTATCTGTCCAATTTCTGGTTCTCTAATGGCTGATCCTGTAATT
GTCTCTTCTGGCCATACATTTGAACGCCACTGTGTTCATGCCTGCAAATCACTTTCTTTT
ACACCTATTCTTCCAGATGGTTCTATCCCTGATTTCTCCACTATTATTCCAAACTTGGCT
CTCAAATCCACTATCCTCAACTTTTGTCGTTCTTCTCTTCTTGACCCTCCAAAACCCATC
AATTTCCTCACTGCTGAAAACCTCGTTTCTTCATTAATGCACACCCAAAAGGCACAAAAC
CTCAGTAGTTTAAGAAATCGAGTACTGAGTCATATCTCAACGAGTTCAGAGGAATCTGTG
ACTCCAAGAAGTGGGCCCACACGTCCCTCTTGTTACTCTTCATCTTCAGCCTCTGACGTG
GACACCCTGAACACTAATTCTTATGAAGAAGATGAACTTGTTGGTAAATTAAAAAGCTCC
CAAGTTTCTGAACAAGAGGAAGCTGTAAGCTATTTTAGGAAGTTGACCCGAACCCGAGAA
GAAACCCGGGTCCAGTTCTGCACCCCTCGTGTATTATCAGCTCTACGTGTACTTATTACA
TCAAGGTATGCTTCAATACAAGTTAATTCAGTAGCTGCATTGGTGAACTTGTCATTAGAG
AATAGAAATAAAGTGAAAATTGTACGTTCTGGAATTGTTCCGCCTTTAATTGATGTGTTA
AAAGGGGGTTTTCAAGAATCACAGGAACATGCTGCGGGTGCAGTTTTTAGTTTAGCATTA
GATGATCAGAACAAGACTGCACTTGGGGTGCTAGGAGCACTGCCTCCGCTTCTTCATGCC
CTTCGCTCCGAATCGGAACGAACTAGGCATGATTCAGCTTTGGCTCTGTATCATCTTTCT
TTGGTTCAGAGTAACAGGGCTAAGTTGGTGAAACTCGGGGCGGTTCAGGCATTGCTTGGA
ATGGTTAAAACGGGTCATATGACGGGTCGGGTCATGTTGATACTTTGTAACCTGGCTGCG
AGTTCTGAAGGGAGAGCAGCAATGCTTGATGGGGGTGCAGTGGAATGTTTTGTTAGTATG
TTGAGAAAGGGAGAGTTTGATTCGGAGTCGAGTCGTGAGAATTGTATTGCTGCATTATAT
GGACTTAGTCATGGTGGGTTAAGGTTTAAAGGGTTGGCAAAGGAGGCTGCTGCAGAGGAG
TTGCTGATGCAAGTTGAGGAAATGGGAAGCGTACGGGCTAAGGATAAGGCTAGAAAGATA
TTGGAGGTGTTGAGGCAGAAGGATGAAGAGGAGGAGGAAGTTGATTGGGAGAAGTTGCTT
AATTCGGATGATGATATCAGTCAATTACGGATAAGTACAAGTTCTTCATAG

Peptide Sequence

PEP ID

XP_016472264.1
PEP Infomation

PREDICTED: U-box domain-containing protein 40-like [Nicotiana tabacum]
Sequence

MGTSKQRWRISFHKSPSKQPSFPKEFICPISGSLMADPVIVSSGHTFERHCVHACKSLSF
TPILPDGSIPDFSTIIPNLALKSTILNFCRSSLLDPPKPINFLTAENLVSSLMHTQKAQN
LSSLRNRVLSHISTSSEESVTPRSGPTRPSCYSSSSASDVDTLNTNSYEEDELVGKLKSS
QVSEQEEAVSYFRKLTRTREETRVQFCTPRVLSALRVLITSRYASIQVNSVAALVNLSLE
NRNKVKIVRSGIVPPLIDVLKGGFQESQEHAAGAVFSLALDDQNKTALGVLGALPPLLHA
LRSESERTRHDSALALYHLSLVQSNRAKLVKLGAVQALLGMVKTGHMTGRVMLILCNLAA
SSEGRAAMLDGGAVECFVSMLRKGEFDSESSRENCIAALYGLSHGGLRFKGLAKEAAAEE
LLMQVEEMGSVRAKDKARKILEVLRQKDEEEEEVDWEKLLNSDDDISQLRISTSSS

Transcript Sequence

Gene sequence data has not been registered.